Summary
Nucleotide sequencing of part of the plasmid pCHAP4, which encodes the ca. 42000 Da putative poreforming colicin N, confirmed previous results indicating that the colicin N immunity gene (cni) and the colicin release or lysis gene (cnl) are located immediately downstream from the colicin N structural gene (cna) in the order cna-cni-cnl. The cni gene is transcribed in the opposite direction to cna and probably encodes an Mr 15239 Da protein. The putative immunity protein was detected among the [35S]methionine-labelled proteins produced by minicells carrying cni cloned under lac promoter control, and when the gene was subcloned into expression vectors under the control of a bacteriophage T7 promoter. Deletion of the region immediately upstream from cni completely abolished colicin N immunity, presumably because the natural promoter had been deleted. cnl is in the same operon as cna, and encodes a typical Col plasmid pro-lysis protein comprising a signal peptide and a 34 residue mature polypeptide with high homology to all but one of the other known Col lysis proteins, including the fatty acylated amino-terminal cysteine residue which was specifically labelled with 3H-palmitate. Cell fractionation studies indicated that the cnl gene product was located predominantly in the outer membrane.
Similar content being viewed by others
References
Biggin MD, Gibson TJ, Hong GF (1983) Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination. Proc Natl Acad Sci USA 80:3963–3965
Bishop LJ, Bjes ES, Davidson VL, Cramer WJ (1985) Localization of the immunity protein-reactive domain in unmodified and chemically-modified COOH-terminal peptides of colicin E1. J Bacteriol 164:237–244
Capaldi RA, Vanderkooi G (1974) The low polarity of many membrane proteins. Proc Natl Acad Sci USA 69:630–632
Cavard D, Lloubès R, Morlon J, Chartier M, Lazdunski C (1985) Lysis protein encoded by plasmid ColA-CA31. Gene sequence and export. Mol Gen Genet 199:95–100
Cavard D, Baty D, Howard SP, Verheij HM, Lazdunski C (1987) Lipoprotein nature of the colicin A lysis protein; effect of amino acid substitutions at the site of modification and processing. J Bacteriol 169:2187–2194
Cole ST, Saint-Joanis B, Pugsley AP (1985) Molecular characterisation of the colicin E2 operon and identification of its products. Mol Gen Genet 198:465–472
Ebina Y, Nakazawa A (1983) Cyclic AMP-dependent initiation and ϱ-dependent termination of colicin E1 gene transcription. J Biol Chem 258:7072–7078
Geli V, Baty D, Lazdunski C (1987) Use of a foregin epitope as a “tag” for localization of minor proteins within a cell: the case of the immunity protein to colicin A. Biochemistry (in press)
Goldman K, Suit JL, Kayalar C (1985) Identification of the plasmid-encoded immunity protein for colicin E1 in the inner membrane of Escherichia coli. FEBS Lett 190:319–323
Hakkaart MJJ, Veltkamp E, Nijkamp HJJ (1981) Protein H encoded by plasmid CloDF13 involved in lysis of the bacterial host: 1. Localisation of the gene and identification and subcellular localisation of the gene H product. Mol Gen Genet 183:318–325
James R, Jarvis M, Barker DF (1987) Nucleotide sequence of the immunity and lysis region of the ColE9-J plasmid. J Gen Microbiol 133:1553–1562
Lloubès R, Chartier MJ, Journet AM, Varenne SG, Lazdunski C (1984) Nucleotide sequence of the gene for the immunity protein to colicin A. Analysis of codon usage of immunity proteins as compared to colicins. Eur J Biochem 144:73–78
Loubès R, Baty D, Lazdunski C (1986) The promoters of the genes for colicin production, release and immunity in the ColA plasmid; effects of convergent transcription and LexA protein. Nucleic Acids Res 14:2621–2636
Luirink J, van der Sande C, Tommassen J, Veltkamp E, de Graaf FK, Oudega B (1986) Mode of action of protein H encoded by plasmid CloDF13; effects of culture conditions and mutations affecting phospholipase A activity on excretion of cloacin DF13 and on growth and lysis of host cells. J Gen Microbiol 132:825–834
Luirink J, Watanabe T, Wu HC, Steghuis F, de Graaf FK, Oudega B (1987) Modification, processing and subcellular localization in Escherichia coli of the pCloDF13-encoded bacteriocin release protein fused to the mature portion of β-lactamase. J Bacteriol 169:2245–2250
Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning. A laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
Mankovich JA, Hsu C-H, Konisky J (1986) DNA and amino acid sequence analysis of structural and immunity genes of colicins Ia and Ib. J Bacteriol 168:228–236
Martinez MC, Lazdunski C, Pattus F (1983) Isolation, molecular and functional properties of the C-terminal domain of colicin A. EMBO J 2:1501–1507
Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
Oka A, Nomura N, Morita M, Sujisaki H, Sugimoto K, Takanami M (1979) Nucleotide sequence of small ColE1 derivatives; structure of the regions essential for autonomous replication and colicin El immunity. Mol Gen Genet 179:151–159
Oudega B, Ykema A, Stegehuis F, de Graaf FK (1984) Detection and subcellular localization of mature protein H, involved in excretion of cloacin DF13, FEMS Microbiol Lett 22:1011–108
Puglsey AP (1984a) Genetic analysis of ColN plasmid determinants for colicin production, release and immunity. J Bacteriol 158:523–529
Pugsley AP (1984b) The ins and outs of colicins. Microbiol Sci 1:168–175
Pugsley AP (1987) Nucleotide sequencing of the structural gene for colicin N reveals homology between the catalytic C-terminal domains of colicins A and N, Mol Microbiol 1:317–325
Pugsley AP, Cole ST (1986) β-galactosidase and alkaline phosphatase do not become extracellular when fused to the aminoterminal part of colicin N. J Gen Microbiol 132:2297–2307
Pugsley AP, Cole ST (1987) An unmodified form of the ColE2 lysis protein, an envelope lipoprotein, retains reduced ability to promote colicin E2 release an lysis of producing cells. J Gen Microbiol 133:2411–2420
Puglsey AP, Oudega B (1987) Methods for studying colicins and their plasmids. In: Hardy K (ed) Plasmids: A practical approach. IRL Press, Oxford, UK, pp 105–161
Pugsley AP, Schwartz M (1983) Expression of a gene in a 400 base pair fragment of plasmid ColE1-P9 is sufficient to cause host cell lysis. J Bacteriol 156:109–114
Pugsley AP, Schwartz M (1984) Colcin E2 release: lysis, leakage or secretion? Possible role of a phospholipase. EMBO J 3:2393–2397
Pugsley AP, d'Enfert C, Cole St (1987) Protein secretion by Escherichia coli: colicins and pullulanase. Proceedings of the Fifth International Symposium of Industrial Microoganisms, Pliva, Zagreb, Yugoslavia, pp 431–438
Sanger F, Nicken S, Coulson AR (1977) DNA sequencing with chain terminating inhibitors. Proc Natl Acad Sci USA 74:5463–5467
Schnaitman CA (1981) Cell fractionation. In: Gerhardt P (ed) Manual of methods for general bacteriology. ASM Publications, Washington DC, pp 52–61
Spratt BG, Hedge PJ, te Heesen S, Edelman A, Broome-Smith JK (1986) Kanamycin-resistant vectors that are analogues of plasmids pUC8, pUC9, pEMBL8 and pEMBL9. Gene 41:337–342
Staden R (1980) A new computer method for the storage and manipulation of DNA gel reading data. Nucleic Acids Res 8:3673–3694
Staden R (1982) An interactive graphics program for comparing and aligning nucleic acid or amino acid sequences. Nucleic Acids Res 10:2951–2961
Tabor S, Richardson CC (1985) A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes. Proc Natl Acad Sci USA 82:1074–1078
Toba M, Masaki H, Ohta T (1986) Primary structures of the ColE2-P9 and ColE3-CA38 lysis genes. J Biochem 99:591–596
Uchimura T, Lau PCK (1987) Nucleotide sequences from colicin E8 operon: homology with ColE2-P9 plasmid. Mol Gen Genet 209:489–493
Waleh NS, Johnson PH (1985) Structural and functional organization of the colicin E1 operon. Proc Natl Acad Sci USA 82:8389–8393
Weaver CA, Redborg AH, Konisky J (1981) Plasmid-determined immunity of Escherichia coli K-12 to colicin Ia is mediated by a plasmid-encoded membrane protein. J Bacteriol 148:817–828
Wu HC, Tokunaga M (1986) Biogenesis of lipoproteins in bacteria. Curr Top Microbiol Immunol 125:127–158
Author information
Authors and Affiliations
Additional information
Communicated by W. Goebel
Rights and permissions
About this article
Cite this article
Pugsley, A.P. The immunity and lysis genes of ColN plasmid pCHAP4. Mol Gen Genet 211, 335–341 (1988). https://doi.org/10.1007/BF00330613
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00330613