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Mobilization of the non-conjugative plasmid RSF1010: A genetic analysis of its origin of transfer

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Summary

The oriT site of the broad host-range multicopy IncQ plasmid RSF1010 was cloned onto the 2.2 kb pBR322-derived vector pED825. By successive subcloning and construction of deletions, the oriT region was localised on an 80-88 bp segment of DNA. This segment was contained within the HaeII fragment of RSF1010 that is known to include the relaxation nick site. The oriT region was sequenced and inverted repeats and sequences homologous to the oriT regions of ColE1 and RK2 were identified. A striking 10 bp inverted repeat at one end of the 88 bp oriT segment may be important for recognition of oriT, and its possible role in transfer is discussed.

As for other plasmids, the oriT region served as the site for recA-independent, transfer-dependent, site-specific recombination. This provides genetic evidence that strand breakage and re-joining occur at oriT during transfer. Mobilization was independent of transcription by RNA polymerase in the donor cell, as shown by the lack of effect of rifampicin. Inversion of the oriT site with respect to the plasmid oriV site showed that there was no functional dependence of oriT on oriV for synthesis of primers possibly involved in recipient conjugal DNA synthesis. Alternative mechanisms are discussed.

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References

  • Achtman M, Willetts N, Clark AJ (1971) Beginning a genetic analysis of conjugational transfer determined by the F factor in E. coli by isolation and characterisation of transfer-deficient mutants. J Bacteriol 106:529–538

    Google Scholar 

  • Altenbuchner J, Schmid K, Schmitt R (1983) Tn1721-encoded tetracycline resistance: mapping of structural and regulatory genes mediating resistance. J Bacteriol 153:111–123

    Google Scholar 

  • Arai K, Kornberg A (1981) Unique primed start of phage ϕx174 DNA replication and mobility of the primosome in a direction opposite chain synthesis. Proc Natl Acad Sci USA 78:69–73

    Google Scholar 

  • Bagdasarian M, Timmis K (1981) Host: vector systems for gene cloning in Pseudomonas. Curr Top Microbiol Immunol 96: 47–67

    Google Scholar 

  • Bagdasarian M, Bagdasarian MM, Coleman S, Timmis KN (1979) New vector plasmids for gene cloning in Pseudomonas. In: Timmis KN, Puhler A (eds) Plasmids of medical, environmental and commercial importance. Elsevier/North Holland, Amsterdam, pp 411–421

    Google Scholar 

  • Bagdasarian M, Lurz R, Ruckert B, Franklin FCH, Bagdasarian MM, Frey J, Timmis KN (1981) Specific-purpose plasmid cloning vectors II. Broad host range, high copy number, RSF1010-derived vectors, and a host-vector system for gene cloning in Pseudomonas. Gene 16:237–247

    Google Scholar 

  • Bagdasarian M, Bagdasarian MM, Lurz R, Nordheim A, Frey J, Timmis KN (1982) Molecular and functional analysis of the broad host range plasmid RSF1010 and construction of vectors for gene cloning in gram-negative bacteria. In: Mitsuhashi S (ed) Drug resistance in bacteria. Proc 3rd Int Symp Tokyo, Japan Scientific Societies Press, Tokyo, Thieme-Stratton Inc, New York, pp 183–197

    Google Scholar 

  • Barth PT (1979) RP4 and R300B as wide host-range plasmid cloning vehicles. In: Timmis KN, Puhler A (eds) Plasmids of medical, environmental and commercial importance. Elsevier/North Holland, Amsterdam, pp 399–410

    Google Scholar 

  • Barth PT, Tobin L, Sharpe GS (1981) Development of broad hostrange plasmid vectors. In: Levy SB, Clowes RC, Koenig EL (eds) Molecular Biology, Pathogenicity and Ecology of Bacterial Plasmids. Plenum Press, New York, pp 439–448

    Google Scholar 

  • Bastia D (1978) Determination of restriction sites and the nucleotide sequence surrounding the relaxation site of ColE1. J Mol Biol 124:601–639

    Google Scholar 

  • Bennett PM, Grinsted J, Richmond MH (1977) Transposition of TnA does not generate deletions. Mol Gen Genet 154:205–211

    Google Scholar 

  • Biggin M, Gibson TJ, Hong GF (1983) Buffer gradient gels and [35S] label as an aid to rapid DNA sequencing. Proc Natl Acad Sci USA 80:3963–3965

    Google Scholar 

  • Birnboim HC, Doly J (1979) A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 1:1512–1523

    Google Scholar 

  • Borck K, Beggs JD, Brammar WJ, Hopkins AS, Murray NE (1976) The construction in vitro of transducing derivatives of phage lambda. Mol Gen Genet 146:199–207

    Google Scholar 

  • Broome-Smith J (1980) RecA independent, site-specific recombination between ColEI or ColK and a miniplasmid they complement for mobilization and relaxation: implications for the mechanism of DNA transfer during mobilization. Plasmid 4:51–63

    Google Scholar 

  • Brown AMC, Willetts NS (1981) A physical and genetic map of the IncN plasmid R46. Plasmid 5:188–201

    Google Scholar 

  • Bukhari AI, Shapiro JA, Adhya SL (1977) DNA insertion elements plasmids and episomes. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY

    Google Scholar 

  • Burkhardt HJ, Riess G, Puhler A (1979) Relationships of group P1 plasmids revealed by heteroduplex experiments: RP1, RP4, R68 and RK2 are identical. J Gen Microbiol 114:341–348

    Google Scholar 

  • Clewell DB, Helinski DR (1970) Properties of a supercoiled DNA-protein relaxation complex and strand specifity of the relaxation event. Biochemistry 9:4428–4440

    Google Scholar 

  • Derbyshire KM, Hatfull G, Willetts NS (1986) Mobilization of the non-conjugative plasmid RSF1010: A genetic and DNA sequence analysis of the mobilization region. Mol Gen Genet 206:165–172

    Google Scholar 

  • Everett R, Willetts NS (1982) Cloning, mutation and location of the F origin of conjugal transfer. EMBO J 1:747–753

    Google Scholar 

  • Finnegan J, Sherratt D (1982) Plasmid ColEI conjugal mobility: The nature of bom, a region required in cis for transfer. Mol Gen Genet 185:344–351

    Google Scholar 

  • Geider K, Kornberg A (1974) Conversion of the M13 viral single strand to the double-stranded replicative forms by purified proteins. J Biol Chem 249:3999–4005

    Google Scholar 

  • Grinsted J, Bennett PM, Richmond MH (1977) A restriction enzyme map of R-plasmid RPI. Plasmid 1:34–37

    Google Scholar 

  • Guerry P, Embden JV, Falkow S (1974) Molecular nature of two non-conjugative plasmids carrying drug resistance genes. J Bacteriol 117:619–630

    Google Scholar 

  • Guiney DG, Yakobson E (1983) Location and nucleotide sequence of the transfer origin of the broad host range plasmid RK2. Proc Natl Acad Sci USA 80:3595–3598

    Google Scholar 

  • Johnson D, Everett R, Willetts NS (1981) Cloning of F DNA fragments carrying the origin of transfer oriT and the fertility inhibition gene finP. J Mol Biol 153:187–202

    Google Scholar 

  • Kingsman A, Willetts NS (1978) The requirements for conjugal DNA synthesis in the donor strain during Flac transfer. J Mol Biol 122:287–300

    Google Scholar 

  • Lanka E, Barth PT (1981) Plasmid RP4 specifies a plasmid deoxyribonucleic acid primase involved in its conjugal transfer and maintenance. J Bacteriol 148:769–781

    Google Scholar 

  • Lederberg EM, Cohen SN (1974) Transformation of S. typhimurium by plasmid DNA. J Bacteriol 119:1072–1074

    Google Scholar 

  • Maat J, Smith AJH (1978) A method for sequencing restriction fragments with dideoxynucleoside triphosphates. Nucleic Acids Res 5:4537–4546

    Google Scholar 

  • Nordheim A, Hashimoto-Gotoh T, Timmis KN (1980) Location of two relaxation nick sites in R6K and single sites in pSC101 and RSF1010 close to origins of vegetative replication: implication for conjugal transfer of plasmid deoxyribonucleic acid. J Bacteriol 144:923–932

    Google Scholar 

  • Queen CL, Korn LJ (1980) Computer analysis of nucleic acids and proteins. Methods Enzymol 65:595–609

    Google Scholar 

  • Schoffl F, Arnold W, Puhler A, Altenbuchner J, Schmitt R (1981) The tetracycline resistance transposons Tn1721 and Tn1771 have three 38 base pair repeats and generate 5 base pair direct repeats. Mol Gen Genet 181:87–94

    Google Scholar 

  • Sief I, Khourg G, Dhar R (1980) A rapid enzymatic DNA sequencing technique: determination of sequence alterations in early Simian virus 40 temperature sensitive and deletion mutations. Nucleic Acids Res 8:2225–2240

    Google Scholar 

  • Snijders A, Van Putten AJ, Veltkamp E, Nijkamp HJJ (1983) Localisation and nucleotide sequence of the bom region of CloDF13. Mol Gen Genet 192:444–451

    Google Scholar 

  • Soeller WC, Marians KJ (1982) Deletion mutations defining the E. coli replication factor Y effector site sequences in pBR322 DNA. Proc Natl Acad Sci USA 79:7253–7257

    Google Scholar 

  • Thompson R, Taylor L, Kelly K, Everett R, Willetts NS (1984) The F plasmid origin of transfer: DNA sequence of wild-type and mutant origins and location of origin-specific nicks. EMBO J 3:1175–1180

    Google Scholar 

  • Warren GJ, Clark AJ (1980) Sequence-specific recombination of plasmid ColE1. Proc Natl Acad Sci USA 77:6724–6728

    Google Scholar 

  • Warren GJ, Saul MW, Sherratt DJ (1979) ColE1 plasmid mobility: essential and conditional functions. Mol Gen Genet 170:103–107

    Google Scholar 

  • Willetts NS (1975) Recombination and the E. coli K12 sex factor F. J Bacteriol 121:36–43

    Google Scholar 

  • Willetts NS (1981) Sites and systems for conjugal DNA transfer in bacteria. In: Levy SB, Clowes RC, Koenig L (eds) Molecular Biology Pathogenicity, and Ecology of Bacterial Plasmids. Plenum Press, New York, pp 207–215

    Google Scholar 

  • Willetts NS, Crowther C (1981) Mobilization of the non-conjugative IncQ plasmid RSF1010. Genet Res 37:311–316

    Google Scholar 

  • Willetts NS, Finnegan DJ (1970) Characteristics of E. coli K12 strains carrying both an F prime and an R factor. Genet Res 16:113–122

    Google Scholar 

  • Willetts NS, Wilkins BM (1984) Processing of plasmid DNA during Bacterial Conjugation. Microbiol Rev 48:24–41

    Google Scholar 

  • Willetts NS, Crowther C, Holloway BW (1981) The insertion sequence IS21 of R68.45 and the molecular basis for mobilization of the bacterial chromosome. Plasmid 6:30–52

    Google Scholar 

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Communicated by N.D.F. Grindley

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Derbyshire, K.M., Willetts, N.S. Mobilization of the non-conjugative plasmid RSF1010: A genetic analysis of its origin of transfer. Mol Gen Genet 206, 154–160 (1987). https://doi.org/10.1007/BF00326551

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