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Organization and expression of the nuclear gene coding for the plastid-specific S22 ribosomal protein from spinach

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Abstract

We report here on the genomic organization and expression of a nuclear gene coding for a plastid ribosomal protein. The gene encodes the plastid-specific ribosomal protein S22 (formerly named CS-S5). Southern blot analysis suggests that the gene is present in one copy in the spinach genome. The gene consists of 5 exons of sizes ranging from 108 to 273 bp and of 4 introns of 1410, 92, 386 and 82 bp. The exon-intron splice junctions and intron branch sites fit well the consensus sequences for plant introns. The major transcription start site has been determined 29 bp upstream of the AUG initiation codon by primer extension and S1 nuclease mapping. No canonical TATA box is found but some other possible promoter motifs are observed. Transcripts are detected in leaves, etiolated leaves, roots and seeds suggesting that the rps22 gene is expressed constitutively. During germination a marked increase in the relative steady-state level of the mRNA can be seen as soon as 24 h after imbibition of the seeds.

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References

  1. Bisanz-Seyer C, Li YF, Seyer P, Mache R: The components of the plastid ribosome are not accumulated synchronously during the early development of spinach plants. Plant Mol Biol 12: 201–211 (1989).

    Google Scholar 

  2. Brown JWS: A catalogue of splice junction and putative branch point sequences from plant introns. Nucl Acids Res 14: 9549–9559 (1986).

    Google Scholar 

  3. Carol P, Li YF, Mache R: Conservation and evolution of the nucleus-encoded chloroplast-specific ribosomal proteins in pea and spinach. Gene 103: 139–145 (1991).

    Google Scholar 

  4. Dudov KP, Perry RP: Properties of a mouse ribosomal protein promoter. Proc Natl Acad Sci USA 83: 8545–8549 (1986).

    Google Scholar 

  5. Gantt JS: Nucleotide sequences of cDNAs encoding four complete nuclear-encoded plastid ribosomal proteins. Curr Genet 14: 519–528 (1988).

    Google Scholar 

  6. Hallick RB, Bottomley W: Proposals for the naming of chloroplast genes. Plant Mol Biol Rep 1(4): 38–43 (1983).

    Google Scholar 

  7. Hariharan N, Perry RP: Functional dissection of a mouse ribosomal protein promoter: significance of the polypyrimidine initiator and an element in the TATA-box region. Proc Natl Acad Sci USA: 87: 1526–1530 (1990).

    Google Scholar 

  8. Hawkins JD. A survey on intron and exon lengths. Nucl Acids Res 16: 9893–9908 (1988).

    Google Scholar 

  9. Johnson CH, Kruft V, Subramanian AR: Identification of a plastid-specific ribosomal protein in the 30S subunit of chloroplast ribosomes and isolation of the cDNA clone encoding its cytoplasmic precursor. J Biol Chem 265: 12790–12795 (1990).

    Google Scholar 

  10. Lagrange T, Carol P, Bisanz-Seyer C, Mache R: Comparative analysis of four different cDNA clones encoding chloroplast ribosomal proteins. In: Mache R, Stutz E, Subramanian AR (eds) The Translational Apparatus of Photosynthetic Organelles, NATO ASI Series vol H55: 107–115 (1991).

  11. Lam E, Chua NH: ASF-2; A factor that binds to the cauliflower mosaic virus 35S promoter and a conserved GATA motif in cab promoters. Plant Cell 1: 1147–1156 (1989).

    Google Scholar 

  12. Link G, Langridge U: Structure of the chloroplast gene for the precursor of the Mr 32.000 photosystem II protein from mustard (Sinapis alba C.). Nucl Acids Res 12: 945–958 (1984).

    Google Scholar 

  13. Mache R: Chloroplast ribosomal proteins and their genes. A review. Plant Sci 72: 1–12 (1991).

    Google Scholar 

  14. Mager WH: Control of ribosomal protein gene expression. Biochim Biophys Acta 949: 1–15 (1988).

    Google Scholar 

  15. Martin W, Lagrange T, Li YF, Bisanz-Seyer C, Mache R: Hypothesis for the evolutionary origin of the chloroplast ribosomal protein L21 of spinach. Curr Genet 18: 553–556 (1990).

    Google Scholar 

  16. McMaster GK, Carmichael GG: Analysis of single-abd double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange. Proc Natl Acad Sci USA 11: 4835–4838 (1977).

    Google Scholar 

  17. Rhodes D, Klug A. An underlying repeat in some transcriptional control sequences corresponding to half a double helical turn of DNA. Cell 46: 123–132 (1986).

    Google Scholar 

  18. Sambrook J, Fritsch EF, Maniatis T. Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1989).

    Google Scholar 

  19. Saunders SE, Burke JF: Rapid isolation of miniprep DNA for double strand sequencing. Nucl Acids Res 18: 4948 (1990).

    Google Scholar 

  20. Shirley BW, Ham DP, Senecoff JF, Berry-Lowe SL, Zurfluh LL, Shah DM, Meagher RB. Comparion of the expression of two highly homologous members of the soybean ribulose-1,5-bisphospate carboxylase small subunit gene family. Plant Mol Biol 14: 909–925 (1990).

    Google Scholar 

  21. Smooker PM, Kruft V, Subramanian AR: A ribosomal protein is encoded in the chloroplast DNA in a lower plant but in the nucleus in Angiosperms. J Biol Chem 265: 16699–16703 (1990).

    Google Scholar 

  22. Smooker PM, Choli T, Subramanian AR: Ribosomal protein L35: Identification in spinach chloroplasts and isolation of a cDNA clone encoding its cytoplasmic precursor. Biochemistry 29: 9733–9736 (1990).

    Google Scholar 

  23. Sugiura M: The chloroplast chromosomes in land plants. Annu Rev Cell Biol 5: 51–70 (1989).

    Google Scholar 

  24. Zhou DX, Mache R: Presence in the stroma of chloroplasts of a large pool of a ribosomal protein not structurally related to any Eschericha coli ribosomal protein. Mol Gen Genet 219: 204–208 (1989) and Erratum Mol Gen Genet 223: 167 (1990).

    Google Scholar 

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Bisanz-Seyer, C., Mache, R. Organization and expression of the nuclear gene coding for the plastid-specific S22 ribosomal protein from spinach. Plant Mol Biol 18, 337–344 (1992). https://doi.org/10.1007/BF00034960

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  • DOI: https://doi.org/10.1007/BF00034960

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