Skip to main content
Log in

Cloning and sequencing of a cDNA encoding ascorbate peroxidase fromArabidopsis thaliana

  • Research Article
  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

A cDNA clone encoding ascorbate peroxidase (AP, EC 1.11.1.11) was isolated from a phage λgt11 library of cDNA fromArabidopsis thaliana by immunoscreening with monoclonal antibodies against the enzyme, and then sequenced. The cDNA insert hybridized to a 1.1 kb poly(A)+ RNA from leaves ofA thaliana. Genomic hybridization suggests that the cDNA obtained here corresponds to a single-copy gene. The N-terminal amino acid sequence ofArabidopsis AP was determined by protein sequencing of the immunochemically purified enzyme, and proved to be homologous to the N-terminal amino acid sequence of the chloroplastic AP of spinach. The predicted amino acid sequence of the mature AP ofA. thaliana, deduced from the nucleotide sequence, consists of 249 amino acid residues, which is 34% homologous with cytochromec peroxidase of yeast, but less homologous with other plant peroxidases. Amino acid residues at the active site of yeast cytochromec peroxidase are conserved in the amino acid sequence ofArabidopsis AP. The poly(dG-dT) sequence, which is a potential Z-DNA-forming sequence, was found in the 3′ untranslated region of the cDNA.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. An G: A potential Z-DNA-forming sequence is an essential upstream element of a plant promoter. BioEssays 7: 211–214 (1987).

    Google Scholar 

  2. Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K: Current Protocols in Molecular Biology. John Wiley & Sons, New York (1987).

    Google Scholar 

  3. Boveris A, Sies H, Martino EE, Docampo R, Turrens JF, Stoppani AOM: Deficient metabolic utilization of hydrogen peroxide inTrypanosoma cruzi. Biochem J 188: 643–648 (1980).

    PubMed  Google Scholar 

  4. Chen G-X, Asada K: Ascorbate peroxidase in tea leaves: Occurrence of two isozymes and the differences in their enzymatic and molecular properties. Plant Cell Physiol 30: 987–998 (1989).

    Google Scholar 

  5. Church GM, Gilbert W: Genomic sequencing. Proc Natl Acad Sci USA 81: 1991–1995 (1984).

    PubMed  Google Scholar 

  6. Dasgupta S, Rousseau DL, Anni H, Yonetani T: Structural characterization of cytochromec peroxidase by resonance Raman scattering. J Biol Chem 264: 654–662 (1989).

    PubMed  Google Scholar 

  7. Fujiyama K, Takemura H, Shinmyo A, Okuda H, Takano M: Genomic DNA structure of two new horseradish-peroxidase-encoding genes. Gene 89: 163–169 (1990).

    Article  PubMed  Google Scholar 

  8. Gerbling K-P, Kelly GJ, Fischer K-H, Latzko E: Partial purification and properties of soluble ascorbate peroxidase from pea leaves. J Plant Physiol 115: 59–67 (1984).

    Google Scholar 

  9. Gillham DJ, Dodge AD: Hydrogen-peroxide-scavenging systems within pea chloroplasts. Planta 167: 246–251 (1986).

    Google Scholar 

  10. Heidecker G, Messing J: Structural analysis of plant genes. Annu Rev Plant Physiol 37: 436–466 (1986).

    Google Scholar 

  11. Hossain MA, Asada K: Inactivation of ascorbate peroxidase in spinach chloroplasts on dark addition of hydrogen peroxide: Its protection by ascorbate. Plant Cell Physiol 25: 1285–1295 (1984).

    Google Scholar 

  12. Hossain MA, Nakano Y, Asada K: Monodehydroascorbate reductase in spinach chloroplasts and its participation in regeneration of ascorbate for scavenging hydrogen peroxide. Plant Cell Physiol 25: 385–395 (1984).

    Google Scholar 

  13. Huynh TV, Young RA, Davis RW: Constructing and screening cDNA libraries in λgt10 and λgt11. In: Glover DM (ed), DNA Cloning: A Practical Approach, Vol. I, pp. 49–78. IRL, Oxford (1985).

    Google Scholar 

  14. Ishihara H, Shikita M: Electroblotting of double-stranded DNA for hybridization experiments: DNA transfer is complete within 10 minutes after pulse-field gel electrophoresis. Anal Biochem 184: 207–212 (1990).

    PubMed  Google Scholar 

  15. Kaput J, Goltz S, Blobel G: Nucleotide sequence of the yeast nuclear gene for cytochromec peroxidase precursor: Functional implications of the pre sequence for protein transport into mitochondria. J Biol Chem 257: 15054–15058 (1982).

    PubMed  Google Scholar 

  16. Kelly GJ, Latzko E: Soluble ascorbate peroxidase. Naturwissenschaften 66: 617–618 (1979).

    PubMed  Google Scholar 

  17. Kornfeld R, Kornfeld S: Assembly of asparagine-linked oligosaccharides. Annu Rev Biochem 54: 631–664 (1985).

    Article  PubMed  Google Scholar 

  18. Lagrimini LM, Burkhart W, Moyer M, Rothstein S: Molecular cloning of complementary DNA encoding the lignin-forming peroxidase from tobacco: Molecular analysis and tissue-specific expression. Proc Natl Acad Sci USA 84: 7542–7546 (1987).

    Google Scholar 

  19. Marchalonis JJ, Weltman JK: Relatedness among proteins: A new method of estimation and its application to immunoglobulins. Comp Biochem Physiol 38B: 609–625 (1971).

    Google Scholar 

  20. Matsudaira P: Sequence from picomole quantities of proteins electroblotted onto polyvinylidene difluoride membranes. J Biol Chem 262: 10035–10038 (1987).

    PubMed  Google Scholar 

  21. Mazza G, Welinder KG: Covalent structure of turnip peroxidase 7: Cyanogen bromide fragments, complete structure, and comparison to horseradish peroxidase C. Eur J Biochem 108: 481–489 (1980).

    PubMed  Google Scholar 

  22. Mehlhorn H, Cottam DA, Lucas PW, Wellburn AR: Induction of ascorbate peroxidase and glutathione reductase activities by interaction of mixtures of air pollutants. Free Rad Res Comm 3: 193–197 (1987).

    Google Scholar 

  23. Miyake C, Michihata H, Asada K: Scavenging of hydrogen peroxide in prokaryotic and eukaryotic algae: Acquisition of ascorbate peroxidase during the evolution of cyanobacteria. Plant Cell Physiol 32: 33–43 (1991).

    Google Scholar 

  24. Nakano Y, Asada K: Hydrogen peroxide is scavenged by ascorbate-specific peroxidase in spinach chloroplasts. Plant Cell Physiol 22: 867–880 (1981).

    Google Scholar 

  25. Nakano Y, Asada K: Purification of ascorbate peroxidase in chloroplasts; its inactivation in ascorbate-depleted medium and reactivation by monodehydroascorbate radical. Plant Cell Physiol 28: 131–140 (1987).

    Google Scholar 

  26. Nakano Y, Edwards GE: Hill reaction, hydrogen peroxide scavenging, and ascorbate peroxidase activity of mesophyll and bundle sheath chloroplasts of NADP-malic enzyme type C4 species. Plant Physiol 85: 294–298 (1987).

    Google Scholar 

  27. Poulos TL, Freer ST, Alden RA, Edwards SL, Skogland U, Takio K, Eriksson B, Xuong N, Yonetani T, Kraut J: The crystal structure of cytochromec peroxidase. J Biol Chem 255: 575–580 (1980).

    PubMed  Google Scholar 

  28. Poulos TL, Kraut J: A hypothetical model of the cytochromec peroxidase. cytochromec electron transfer complex. J Biol Chem 255: 10322–10330 (1980).

    PubMed  Google Scholar 

  29. Rich A, Nordheim A, Wang AH-J: The chemistry and biology of left-handed Z-DNA. Annu Rev Biochem 53: 791–846 (1984).

    Article  PubMed  Google Scholar 

  30. Rönnberg M, Kalkkinen N, Ellfolk N: The primary structure ofPseudomonas cytochromec peroxidase. FEBS Lett 250: 175–178 (1989).

    Article  PubMed  Google Scholar 

  31. Saji H, Tanaka K, Kondo N: Monoclonal antibodies to spinach ascorbate peroxidase and immunochemical detection of the enzyme in eight different plant species. Plant Sci 69: 1–9 (1990).

    Article  Google Scholar 

  32. Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY (1989).

    Google Scholar 

  33. Shigeoka S, Nakano Y, Kitaoka S: Purification and some properties of L-ascorbic acid-specific peroxidase inEuglena gracilis Z. Arch Biochem Biophys 201: 121–127 (1980).

    PubMed  Google Scholar 

  34. Smirnoff N, Colombé SV: Drought influences the activity of enzymes of the chloroplast hydrogen peroxide scavenging system. J Exp Bot 39: 1097–1108 (1988).

    Google Scholar 

  35. Takio K, Titani K, Ericsson LH, Yonetani T: Primary structure of yeast cytochromec peroxidase II. The complete amino acid sequence. Arch Biochem Biophys 203: 615–629 (1980).

    PubMed  Google Scholar 

  36. Tanaka K, Masuda R, Sugimoto T, Omasa K, Sakaki T: Water deficiency-induced changes in the contents of defensive substances against active oxygen in spinach leaves. Agric Biol Chem 54: 2629–2634 (1990).

    Google Scholar 

  37. Tanaka K, Suda Y, Kondo N, Sugahara K: O3 tolerance and the ascorbate-dependent H2O2 decomposing system in chloroplasts. Plant Cell Physiol 26: 1425–1431 (1985).

    Google Scholar 

  38. Tanaka K, Takeuchi E, Kubo A, Sakaki T, Haraguchi K, Kawamura Y: Two immunologically different isozymes of ascorbate peroxidase from spinach leaves. Arch Biochem Biophys 286: 371–375 (1991).

    PubMed  Google Scholar 

  39. Tel-Or E, Huflejt ME, Packer L: Hydroperoxide metabolism in cyanobacteria. Arch Biochem Biophys 246: 396–402 (1986).

    PubMed  Google Scholar 

  40. Triggs-Raine BL, Doble BW, Mulvey MR, Sorby PA, Loewen PC: Nucleotide sequence ofkatG, encoding catalase HPI ofEscherichia coli. J Bact 170: 4415–4419 (1988).

    PubMed  Google Scholar 

  41. Welinder KG: Amino acid sequence studies of horseradish peroxidase: Amino and carboxyl termini, cyanogen bromide and tryptic fragments, the complete sequence, and some structural characteristics of horseradish peroxidase C. Eur J Biochem 96: 483–502 (1979).

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kubo, A., Saji, H., Tanaka, K. et al. Cloning and sequencing of a cDNA encoding ascorbate peroxidase fromArabidopsis thaliana . Plant Mol Biol 18, 691–701 (1992). https://doi.org/10.1007/BF00020011

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00020011

Key words

Navigation