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Verification of Differential Display Results by RNase Protection

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Fingerprinting Methods Based on Arbitrarily Primed PCR

Part of the book series: Springer Lab Manuals ((SLM))

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Abstract

The differential display-polymerase chain reaction (DDRT-PCR) technique is a powerful method for detecting differentially expressed genes (Liang and Pardee 1992). Nonetheless, DDRT-PCR, with about 300 different primer combinations, typically results in about 50–100 differentially displayed bands, of which about 10%–40% may be artifacts. The number of artifacts can be reduced by including several identical RNA samples; however, because of the high number of artifacts it is essential to verify the differential expression. This can be done by several different quantitative or semi-quantitative approaches, e.g., northern blotting, nuclear run-on assay, quantitative PCR and RNase protection.

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© 1997 Springer-Verlag Berlin Heidelberg

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Hummel, R., Jørgensen, M., Bévort, M., Grønborg, M., Leffers, H. (1997). Verification of Differential Display Results by RNase Protection. In: Micheli, M.R., Bova, R. (eds) Fingerprinting Methods Based on Arbitrarily Primed PCR. Springer Lab Manuals. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-60441-6_34

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  • DOI: https://doi.org/10.1007/978-3-642-60441-6_34

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-47812-3

  • Online ISBN: 978-3-642-60441-6

  • eBook Packages: Springer Book Archive

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