Abstract
In this work, a deep learning system for cannabis plants disease, nutrient deficiencies and pests identification is developed, based on image data processed by convolutional neural network models. Training of the models was performed using image data available on the Internet, while database development included data cleansing by expert agronomists, basic image editing, and data augmentation techniques commonly used in deep learning applications in order to expand the rather limited amount of available data. Three fungi diseases, two pests and three nutrient deficiencies were included in the identification system, together with healthy plants identification. The final model reached a performance of 90.79% in successfully identifying cannabis diseases (or healthy plants) in previously “unseen” plant images. The most difficult cannabis problems to be identified were powdery mildew and potassium deficiency. Results showed that transfer learning from existing models specialized in similar tasks to the one under development, is more successful than using transfer learning from more general models. Finally, even though the amount of training images in some of the considered problems was significantly small, no correlation between model performance and the size of the training dataset for each category was found.
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References
Andre, C.M., Hausman, J.-F., Guerriero, G.: Cannabis sativa: the plant of the thousand and one molecules. Front. Plant Sci. 7, 19 (2016)
Clarke, R.C., Merlin, M.D.: Cannabis: Evolution and Ethnobotany. University of California Press, Los Angeles and Berkeley (2013)
Clarke, R.C.: Marijuana Botany: An Advanced Study: The Propagation and Breeding of Distinctive Cannabis. Ronin Publishing, Oakland (1981)
Small, E.: Cannabis, a Complete Guide. CRC Press, Boca Raton (2017)
FAOSTAT. http://www.fao.org/faostat/en/#compare. Accessed 04 Apr 2019
Punja, Z.K.: Flower and foliage-infecting pathogens of marijuana (Cannabis sativa L.) plants. Can. J. Plant Pathol. 40(4), 514–527 (2018)
Tyagi, A.C.: Towards a second green revolution. Irrig. Drainage 65(4), 388–389 (2016)
Gebbers, R., Adamchuk, V.I.: Precision agriculture and food security. Science 327, 828–831 (2010)
Mohanty, S.P., Hughes, D.P., Salathé, M.: Using deep learning for image-based plant disease detection. Front. Plant Sci. 7, 1419 (2016)
Yang, X., Guo, T.: Machine learning in plant disease research. Eur. J. BioMed. Res. 3(1), 6–9 (2017)
Ferentinos, K.P.: Deep learning models for plant disease detection and diagnosis. Comput. Electron. Agric. 145, 311–318 (2018)
LeCun, Y., Bengio, Y., Hinton, G.: Deep learning. Nature 521, 436–444 (2015)
Kamilaris, A., Prenafeta-Boldú, F.: Deep learning in agriculture: a survey. Comput. Electron. Agric. 147, 70–90 (2018)
LeCun, Y., Bottou, L., Bengio, Y., Haffner, P.: Gradient-based learning applied to document recognition. Proc. IEEE 86(11), 2278–2324 (1998)
Dan, C., Meier, U., Masci, J., Gambardella, L.M., Schmidhuber, J.: Flexible, high performance convolutional neural networks for image classification. In: Proceedings of the 22nd International Joint Conference on Artificial Intelligence, vol. 2, pp. 1237–1242 (2011)
Hinton, G., et al.: Deep neural networks for acoustic modeling in speech recognition: the shared views of four research groups. IEEE Sig. Process. Mag. 29(6), 82–97 (2012)
LeCun, Y., Bengio, Y.: Convolutional networks for images, speech, and time series. In: The Handbook of Brain Theory and Neural Networks, vol. 3361(10). MIT Press (1995)
Grinblat, G.L., Uzal, L.C., Larese, M., Granitto, P.: Deep learning for plant identification using vein morphological patterns. Comput. Electron. Agric. 127, 418–424 (2016)
Dyrmann, M., Jorgensen, R.N., Midtiby, H.S.: Detection of weed locations in leaf occluded cereal crops using a fully convolutional neural network. In: 11th European Conference on Precision Agriculture, pp. 842–847 (2017)
Dyrmann, M., Skovsen, S., Laursen, M.S., Jorgensen, R.N.: Using a fully convolutional neural network for detecting locations of weeds in images from cereal fields. In: 14th International Conference on Precision Agriculture, Montreal, Quebec, Canada (2018)
Cheng, X., Zhang, Y., Chen, Y., Wu, Y., Yue, Y.: Pest identification via deep residual learning in complex background. Comput. Electron. Agric. 141, 351–356 (2017)
Toda Y., Okura F.: How convolutional neural networks diagnose plant disease. Plant Phenomics 2019(9237136) (2019)
Barbedo, J.G.A.: Factors influencing the use of deep learning for plant disease recognition. Biosyst. Eng. 172, 84–91 (2018)
Sladojevic, S., Arsenovic, M., Anderla, A., Culibrk, D., Stefanovic, D.: Deep neural networks based recognition of plant diseases by leaf image classification. Comput. Intell. Neurosci. 2016, 11 (2016)
Pawara, P., Okafor, E., Surinta, O., Schomaker, L., Wiering, M.: Comparing local descriptors and bags of visual words to deep convolutional neural networks for plant recognition. In: 6th International Conference on Pattern Recognition Applications and Methods (2017)
Lin, K., Gong, L., Huang, Y., Liu, C., Pan, J.: Deep learning-based segmentation and quantification of cucumber powdery mildew using convolutional neural network. Front. Plant Sci. 10, 155 (2019)
Barbedo, J.G.A.: Plant disease identification from individual lesions and spots using deep learning. Biosyst. Eng. 180, 96–107 (2019)
An, J., Li, W., Li, M., Cui, S., Yue, H.: Identification and classification of maize drought stress using deep convolutional neural network. Symmetry 11(2), 256 (2019)
McPartland, J.M.: A review of Cannabis diseases. J. Int. Hemp Assoc. 3(1), 19–23 (1996)
McPartland, J.M.: Cannabis pathogens XI: Septoria spp. on Cannabis sativa, sensu strico. Sydowia 47, 44–53 (1995)
McPartland, J.M.: Cannabis pathogens X: Phoma, Ascochyta and Didymella species. Mycologia 86, 870–878 (1995)
McPartland, J.M.: Common names for diseases of Cannabis sativa L. Plant Dis. 75, 226–227 (1991)
Thompson, G.R., et al.: A microbiome assessment of medical marijuana. Clin. Microbiol. Infect. 23(4), 269–270 (2017)
Frank, M.: Marijuana Grower’s Insider’s Guide. Red Eye Press, Los Angeles (1988)
McPartland, J.M., Clarke, R.B., Watson, D.P.: Hemp Diseases and Pests Management and Biological Control. CABI Publishing, United Kingdom (2000)
McPartland, J.M.: Cannabis pests. J. Int. Hemp Assoc. 3(2), 49–52 (1996)
Krizhevsky, A., Sutskever, I., Hinton, G.E.: Imagenet classification with deep convolutional neural networks. In: Pereira, F., Burges, C.J.C., Bottou, L., Weinberger, K.Q. (eds.) Advances in Neural Information Processing Systems, pp. 1097–1105 (2012)
Krizhevsky, A.: One weird trick for parallelizing convolutional neural networks arXiv:1404.5997 (2014)
Szegedy, C., Liu, W., Jia, Y., Sermanet, P., Reed, S., Anguelov, D., et al.: Going deeper with convolutions. In: Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition (2015)
Sermanet, P., Eigen, D., Zhang, X., Mathieu, M., Fergus, R., LeCun, Y.: Overfeat: integrated recognition, localization and detection using convolutional networks arXiv:1312.6229 (2013)
Simonyan, K., Zisserman, A.: Very deep convolutional networks for large-scale image recognition arXiv:1409.1556 (2014)
Bengio, Y.: Learning deep architectures for AI. Found. Trends® Mach. Learn. 2(1), 1–127 (2009)
Acknowledgments
This research has been co-financed by the European Union and Greek national funds through the Operational Program Competitiveness, Entrepreneurship and Innovation, under the call RESEARCH – CREATE – INNOVATE (project code: T1EDK-02182).
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Ferentinos, K.P., Barda, M., Damer, D. (2019). An Image-Based Deep Learning Model for Cannabis Diseases, Nutrient Deficiencies and Pests Identification. In: Moura Oliveira, P., Novais, P., Reis, L. (eds) Progress in Artificial Intelligence. EPIA 2019. Lecture Notes in Computer Science(), vol 11804. Springer, Cham. https://doi.org/10.1007/978-3-030-30241-2_12
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