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Environmental Impact of Soil Microorganisms on Global Change

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Abstract

The following review introduces a novel environmental factor—Biomonitoring as a tool for the detoxification of soil contaminants by soil microorganisms. They contribute plant to increase pollutants resistance and caused by global warming. They function by detoxifying heavy hydrocarbon compounds and converting them to a soil protein called glomalin (glomalin-related soil protein—GRSP) whose content has been determined recently. It is proposed to be correlated by the abundance and activity of the soil beneficial microorganisms such as arbuscular mycorrhizal fungi (AMF) in some natural contaminated sites around the world. Recently our finding indicated that the combination of environmental stresses (e.g., pharmaceuticals compounds in the waste water, herbicide compounds, and drought) may enhance the symbiotic efficiencies and the synergistic beneficial interactions of the dominant plant species. The aim of this review is to highlight some recent advances in soil microorganism impacts on the contaminants detoxification as global changing main factor to enhance environmental quality against the global warming. Another approach in this review is to improve the understanding of the processes behind the global change, which will contribute to better maintenance of optimum environmental quality, an important component of soil fertility, and therefore is of increasing interest in the sustainable management of marginal and sensitive low-input soils. Our objectives are to discuss possible functioning of detoxification, allocation and partitioning of soil pollutants by AMF and their possible conjugation to glomalin soil protein.

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Abbreviations

AMF:

Arbuscular mycorrhizal fungi

CDNB:

1-chloro, 2,4-dinitrobenzene

DCNB:

1,2-Dichloro-4-nitrobenzene

DNA:

Deoxyribonucleic acid

GRSP:

Glomalin-related soil protein

GST:

Glutathione S-transferases

HEAR:

High Erucic Acid Rapeseed

HM:

Heavy metals

ITS:

Internal transcribed spacer

KCS:

b-Ketoacyl-CoA synthase

MCB:

Monochlorobimane

PCR:

Polymerase chain reaction

PGPR:

Plant-growth-promoting

p-NBoC:

1,2-Dichloro-4-nitrobenzoyl-chloride

rDNA:

Recombinant DNA

RNA:

Ribonucleic acid

rRNA:

Ribosomal ribonucleic acid

SOM:

Soil organic maters

TAGs:

Triacylglycerols

USDA:

United States Department of Agriculture

References

  1. Schesinger WH (1997) Biogeochemistry: an analysis of global change, 2nd edn. Academic, San Diego, CA

    Google Scholar 

  2. http://files.eesi.org/stern_111306.pdf

  3. Requena N, Perez Solis E, Azcon Aguilar C, Jeffries P, Barea JM (2001) Management of indigenous plant-microbe symbioses aids restoration of desertified ecosystems. Appl Environ Microb 67:495–498

    Article  Google Scholar 

  4. Schroeder P (2011) Organic xenobiotics and plants: from mode of action to ecophysiology. Springer, Berlin, p 312

    Book  Google Scholar 

  5. Abbott LK, Robson AD (1991) Factors of affecting the occurrence of vesicular-arbuscular mycorrhizas. Agric Ecosyst Environ 35:39–64

    Article  Google Scholar 

  6. Streitwolf-Engel R, van der Heijden MAG, Wiemken A, Sanders IR (2001) The ecological significance of arbuscular mycorrhizal fungal effects on clonal reproduction in plants. Ecology 82(10):2846–2859

    Article  Google Scholar 

  7. van der Heijden MAG, Boller T, Wiemken A, Sanders IR (1998) Different Arbuscular mycorrhizal fungal species are potential determinants of plant community structure. Ecology 79(6):2082–2091

    Article  Google Scholar 

  8. Gianinazzi-Pearson V, Branzanti B, Gianinazzi S (1989) In vitro enhancement of spore germination and early hyphal growth of a vesicular arbuscular mycorrhizal fungus by host root exudates and plant flavonoids. Symbiosis 7:243–255

    Google Scholar 

  9. Tisdall JM, Oades JM (1982) Organic matter and water-stable aggregates in soils. J Soil Sci 33:141–163

    Article  Google Scholar 

  10. Ruth B, Khalvati MA, Schmidhalter U (2011) Quantification of water flow through hyphae of mycorrhizal plants measured by capacitance sensors for soil water content, plant and soil. Plant and Soil 342(1–2):459–468

    Article  Google Scholar 

  11. Schreiner RP, Bethlenfalvay GJ (1997) Mycorrhizae, biocides, and biocontrol 3. Effects of three different fungicides on developmental stages of three AM fungi. Biol Fertil Soils 24:18–26

    Article  Google Scholar 

  12. Piotrowski JS, Denich T, Klironomos JN, Graham JM, Rillig MC (2004) The effects of arbuscular mycorrhizae on soil aggregation depend on the interaction between plant and fungal species. New Phytol 164:365–373

    Article  Google Scholar 

  13. Enkhtuya B, Vosatka M (2005) Interaction between grass and trees mediated by extraradical mycelium of symbiotic arbuscular mycorrhizal fungi. Symbiosis 38:261–277

    Google Scholar 

  14. Landwehr M, Hildebrandt U, Wilde P, Nawrath K, Toth T, Biro B, Bothe H (2002) The arbuscular mycorrhizal fungus Glomus geosporum in European saline, sodic and gypsum soils. Mycorrhiza 12:199–211

    Article  Google Scholar 

  15. Vivas A, Vörös I, Biró B, Campos E, Barea JM, Azcón R (2003) Symbiotic efficiency of autochthonous arbuscular mycorrhizal fungus (G. Mossae) and Brevibacillus sp. isolated from cadmium polluted soil under increasing cadmium levels. Environ Pollut 126:179–189

    Article  Google Scholar 

  16. Vivas A, Vörös I, Biró B, Barea JM, Ruiz-Lozano JM, Azcón R (2003) Beneficial effects of indigenous Cd-tolerant and Cd-sensitive Glomus mossae associated with Cd-adapted strain of Brevibacillus sp. in improving plant tolerance to Cd contamination. Appl Soil Ecol 24:177–186

    Article  Google Scholar 

  17. Vivas A, Biró B, Ruíz-Lozano JM, Barea JM, Azcón R (2006) Two bacterial strains isolated from a Zn-polluted soil enhance plant growth and mycorrhizal efficiency under Zn-toxicity. Chemosphere 62:1523–1533

    Article  Google Scholar 

  18. Rillig MC (2004) Arbuscular mycorrhizae, glomalin and soil quality. Can J Soil Sci 84:355–363

    Article  Google Scholar 

  19. Rillig MC, Hoye AT, Carren A (2006) Minimal direct contribution of arbuscular mycorrhizal fungi to DOC leaching in grassland through losses of glomalin-related soil protein. Soil Biol Biochem 38:2967–2970

    Article  Google Scholar 

  20. Droog F (1997) Plant glutathione S-transferases, a tale of theta and tau. J Plant Growth Regul 16:95–107

    Article  Google Scholar 

  21. Edwards R, Dixon RA (1991) Glutathione 5-cirmamoyl transferases in plants. Phytochemistry 30:79–84

    Article  Google Scholar 

  22. Marrs KA, Alfenito MR, Lloyd AM, Walbot V (1995) A glutathione S-transferase involved in vacuolar transfer encoded by the maize gene Bronze-2. Nature 375:397–400

    Article  Google Scholar 

  23. Hatzios KK (2001) Functions and regulation of plant glutathione-S-transferases. In: Hall JC, Hoagland RE, Zablotowicz RM (eds) Pesticide biotransformation in plants and microorganisms: similarities and divergences. American Chemical Society, Washington, DC, pp 218–239

    Google Scholar 

  24. Marrs KA (1996) The functions and regulation of glutathione Stransferases in plants. Annu Rev Plant Physiol Plant Mol Biol 47:127–157

    Article  Google Scholar 

  25. Bilang J, Sturm A (1995) Cloning and characterization of a glutathione S-transferase that can be photolabeled with 5-azido-indole-3-acetic acid. Plant Physiol 109(1):253–260

    Article  Google Scholar 

  26. Davis KR, Sharma YK (1994) Ozone-induced expression of stress-related genes in Arabidopsis thaliana. Plant Physiol 105:1089–1096

    Google Scholar 

  27. Dudler R et al (1991) A pathogen induced wheat gene encodes a protein homologous to glutathione S transferases. Mol Plant Microbe Interact 4:14–18

    Article  Google Scholar 

  28. Hagen G, Uhrhammer N, Guilfoyle TJ (1998) Regulation of expression of an auxin-induced soybean sequence by cadmium. J Biol Chem 263:6442–6446

    Google Scholar 

  29. Kusaba M, Takahashi Y, Nagata T (1996) A multiple-stimuli-responsive as-1-related element of parA gene confers responsiveness to cadmium but not to copper. Plant Physiol 111:1161–1167

    Article  Google Scholar 

  30. Khalvati M, Bartha B, Dupigny A, Schroder P (2010) Arbuscular mycorrhizal association is beneficial for growth and detoxification of xenobiotics of barley under drought stress. J Soil Sediment 10:54–64

    Article  Google Scholar 

  31. Foyer CH, Lelandais M, Kunert KJ (1994) Photooxidative stress in plants. Physiol Plant 92:696–717

    Article  Google Scholar 

  32. Olsson PA, Larsson L, Bago B, Wallander H, van Aarle IM (2003) Ergosterol and fatty acids for biomass estimates of mycorrhizal fungi. New Phytol 159:7–10

    Article  Google Scholar 

  33. Wright SF, Franke-Snyder M, Morton JB, Upadhyaya A (1996) Time-course study and partial characterization of a protein on hyphae of arbuscular mycorrhizal fungi during active colonization of roots. Plant and Soil 181:193–203

    Article  Google Scholar 

  34. Wright SF, Upadhyaya A (1998) A survey of soils for aggregate stability and glomalin, a glycoprotein produced by hyphae of arbuscular mycorrhizal mycorrhizal fungi. Plant and Soil 198:97–107

    Article  Google Scholar 

  35. Wright SF, Starr JL, Paltineanu IC (1999) Changes in aggregate stability and concentration of glomalin during tillage management transition. Soil Sci Soc Am J 63:1825–1829

    Article  Google Scholar 

  36. Lovelock CE, Wright SF, Nichols KA (2004) Using glomalin as an indicator for arbuscular mycorrhizal hyphal growth: an example from a tropical rain forest soil. Soil Biol Biochem 36:1009–1012

    Article  Google Scholar 

  37. Wright SF, Upadhyaya A (1999) Quantification of arbuscular mycorrhizal activity by the glomalin concentration on hyphae. Mycorrhiza 8:283–285

    Article  Google Scholar 

  38. Hosny M, GianinazziPearson V, Dulieu H (1998) Nuclear DNA contents of 11 fungal species in Glomales. Genome 41:422–429

    Article  Google Scholar 

  39. Hijri M, Hosny M, van Tuinen D, Dulieu H (1999) Intraspecific ITS polymorphism in Scutellospora casta-nea (Glomales, Zygomycota) is structured within multinucleate spores. Fung Genet Biol 26:141–151

    Article  Google Scholar 

  40. Walker RG, Plint AG (1992) Wave- and storm-dominated shallow marine systems. In: Walker RG, James NP (eds) Facies models: response to sea-level change. Geological Association of Canada, St Johns, pp 219–238

    Google Scholar 

  41. Lanfranco L, Delpero M, Bonfante P (1999) Intrasporal variability of ribosomal sequences in the endomycorrhizal fungus Gigaspora margarita. Mol Ecol 8:37–45

    Article  Google Scholar 

  42. Redecker D, Hijri I, Wiemken A (2003) Molecular identification of arbuscular mycorrhizal fungi in roots: perspectives and problems. Folia Geobotanica 38:113–124

    Article  Google Scholar 

  43. Rani SS, Kunwar IK, Prasad GS, Manohara C (2004) Glomus hyderabadensis, a new species: its taxonomy and phy- logenetic comparison with related species. Mycotaxon 89:245–253

    Google Scholar 

  44. Simon S (1996) Physiology of the Glomus: deciphering the past to understand the present. New Phytol 133(95):101

    Google Scholar 

  45. Lloyd-MacGilp SA, Chambers SM, Dodd JC, Fitter AH, Walker C, Young JPW (1996) Diversity of the internal transcribed spacers within and among isolates of Glomus mosseae and related arbuscular mycorrhizal fungi. New Phytol 133:103–111

    Article  Google Scholar 

  46. Antoniolli ZI, Schachtman DP, Ophel-Keller K, Smith SE (2000) Variation in rDNA ITS sequences in Glomus mosseae and Gigaspora margarita spores from a permanent pasture. Mycol Res 104:708–715

    Article  Google Scholar 

  47. Clapp JP, van der Stoel I, van der Putten WH (2000) Identification of cyst nematodes (Heterodera, Globodera) and root-knot nematodes (Meloidogyne) on the basis of ITS2 sequence variation detected by PCR-SSCP (PCR-single-strand conformational polymorphism). Mol Ecol 9:1223–1232

    Article  Google Scholar 

  48. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phytogenetics. In: PCR protocols: a guide to methods and applications. Academic, London, pp 315–322

    Google Scholar 

  49. Zarei Mehdi, Nahid Saleh Rastin, Gholamreza Savaghebi, Mojtaba Khayam Nekouie,Gholamreza Salehi Jouzani, Mohammad Ali Khalvati, 2006, Analysis of changes in spore numbers of Arbuscular Mycorrhiza and colonization percent of native plants roots in Angooran, Zanjan region, Proceeding book of The first congress on soil, Environment and Stable Development, Tehran University, p. 13–14

    Google Scholar 

  50. Rillig MC, Mummey DL (2006) Mycorrhizas and soil structure. New Phytol 171:41–53

    Article  Google Scholar 

  51. Wright SF, Upadhyaya A (1996) Extraction of an abundant and unusual protein from soil and comparison with hyphal protein of arbuscular mycorrhizal fungi. Soil Sci 161:575–586

    Article  Google Scholar 

  52. Rillig MC (2004) Arbuscular mycorrhizae and terrestrial ecosystem processes. Ecol Lett 7:740–754

    Article  Google Scholar 

  53. Steinberg PD, Rillig MC (2003) Differential decomposition of arbuscular mycorrhizal fungal hyphae and glomalin. Soil Biol Biochem 35:191–194

    Article  Google Scholar 

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Khalvati, M., Dincer, I. (2013). Environmental Impact of Soil Microorganisms on Global Change. In: Dincer, I., Colpan, C., Kadioglu, F. (eds) Causes, Impacts and Solutions to Global Warming. Springer, New York, NY. https://doi.org/10.1007/978-1-4614-7588-0_15

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  • DOI: https://doi.org/10.1007/978-1-4614-7588-0_15

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