Skip to main content
Log in

Chitinolytic Activity of Cold Tolerant Antagonistic Species of Streptomyces Isolated from Glacial Sites of Indian Himalaya

  • Published:
Current Microbiology Aims and scope Submit manuscript

Abstract

Seventy-eight isolates of actinomycetes were isolated from the soil samples collected from alpine zones of Pindari glacier region in Indian Himalaya. Following a plate based rapid screening using two test fungi, five efficient isolates (nos. HA1, HA2, HA6, HA40, and HA142) were selected for further characterization with special reference to their antagonistic properties. Based on phenotypic and genotypic characters, the isolates were identified up to species level. All the isolates belonged to the genus Streptomyces. The isolate nos. HA1 and HA2 were Ssampsonii and HA6, HA40 and HA142 were Sgriseobrunneus, Saurantiacus, and Sgriseoluteus, respectively. The isolates showed strong antifungal properties against phytopathogenic test fungi in plate assays. All the isolates hydrolyzed glycol–chitin as a substrate in denaturing conditions showing variable amount of different isoforms.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4

Similar content being viewed by others

References

  1. Alexander M (1977) Introduction to soil microbiology, 2nd edn. Wiley, New York

    Google Scholar 

  2. Antonova-Nikonova S, Tzekova N, Yocheva L (2004–05) Taxonomy of Streptomyces sp. strain 3B. J Cult Collect 4:36–42

    Google Scholar 

  3. Apichaisataienchote B, Altenuchner J, Buchenauer H (2005) Isolation and identification of Streptomyces fradiae SU-1 from Thailand and protoplast transformation with the chitinase B gene from Nocardiopsis prasina OPC-131. Curr Microbiol 51:116–121

    Article  PubMed  CAS  Google Scholar 

  4. Bollag DM, Rozycki MD, Edelstein SJ (1996) Protein methods, 2nd edn. Wiley, New York

    Google Scholar 

  5. Chaurasia B, Pandey A, Palni LMS, Trivedi P, Kumar B, Colvin N (2005) Diffusible and volatile compounds produced by an antagonistic Bacillus subtilis strain cause structural deformities in pathogenic fungi in vitro. Microbiol Res 160:75–81

    Article  PubMed  CAS  Google Scholar 

  6. Collins CH, Lyne PM (1980) Microbiological methods. Butterworth and Co. (Publishers) Ltd, London

    Google Scholar 

  7. Crawford DL, Lynch JM, Whipps JM, Qusley MA (1993) Isolation and characterization of actinomycetes antagonists of a fungal root pathogen. Appl Environ Microbiol 59:3899–3905

    PubMed  Google Scholar 

  8. Deshpande MV (1986) Enzymatic degradation of chitin and its biological applications. J Sci Ind Res 45:273–281

    CAS  Google Scholar 

  9. Fenice M, Selbmann L, Di Giambattista R, Federici F (1998) Chitinolytic activity at low temperature of an Antarctic strain (A3) of Verticillium lecanii. Res Microbiol 149:289–300

    Article  PubMed  CAS  Google Scholar 

  10. Fourati-Ben Fguira L, Fotso S, Ben Ameur-Mehdi R, Mellouli L, Laatsch H (2005) Purification and structure elucidation of antifungal and antibacterial activities of a newly isolated Streptomyces sp. strain US80. Res Microbiol 156:341–347

    Article  PubMed  CAS  Google Scholar 

  11. Garkoti SC (2008) Estimates of biomass and primary productivity in a high-altitude maple forest of the west central Himalayas. Ecol Res 23:41–49

    Article  Google Scholar 

  12. Goodfellow M, Williams ST, Mordarski M (eds) (1988) Actinomycetes in biotechnology. Academic Press, San Diego

    Google Scholar 

  13. Gupta RR, Saxena K, Chaturvedi P, Virdi JS (1995) Chitinase production by Streptomyces viridificans: it’s potential in fungal cell wall lysis. J Appl Bacteriol 78:378–383

    PubMed  CAS  Google Scholar 

  14. Gushterova A, Vasileva-Tonkova E, Dimova E, Nedkov P, Haertle T (2005) Keratinase production by newly isolated Antartic actinomycete strains. World J Microbiol Biotechnol 21:831–834

    Article  CAS  Google Scholar 

  15. Hsu SC, Lockwood JL (1975) Powdered chitin agar as a selective medium for enumeration of actinomycetes in water and soil. Appl Microbiol 29:422–426

    PubMed  CAS  Google Scholar 

  16. Labeda DP, Shearer MC (1990) Isolation of actinomycetes for biotechnology applications 2-15. In: Labeda DP (ed) Isolation of biotechnological organisms from nature. Mc-Graw Hill Publication Company, USA, pp 1–19

    Google Scholar 

  17. Laemmli UK (1970) Cleavage of structural proteins during the assembly of head of bacteriophage T4. Nature (London) 277:680–685

    Article  Google Scholar 

  18. Lim H, Kim Y, Kim S (1991) Pseudomonas stutzeri YLP-1 genetic transformation and antifungal mechanism against Fusarium solani, an agent of plant root rot. Appl Environ Microbiol 57:510–516

    PubMed  CAS  Google Scholar 

  19. Locci R (1989) Streptomycetes and related genera. In: Williams ST, Sharpe ME, Holt JG (eds) Bergey’s manual of systematic bacteriology. Williams & Wilkins, Baltimore, pp 2451–2508

    Google Scholar 

  20. Margesin R (2009) Effect of temperature on growth parameters of psychrophilic bacteria and yeasts. Extremophiles 13:257–262

    Article  PubMed  Google Scholar 

  21. Meyer JM, Abdallah MA (1978) The fluorescent pigment of Pseudomonas fluorescens: biosynthesis, purification and physiochemical properties. J Gen Microbiol 107:319–328

    CAS  Google Scholar 

  22. Meyer JM, Azelvandre P, Georges C (1992) Iron metabolism in Pseudomonas: salicylic acid, a siderophore of Pseudomonas fluorescens CHAO. Biofactors 4:23–27

    PubMed  CAS  Google Scholar 

  23. Mukherjee G, Sen SK (2006) Purification, characterization and antifungal activity of chitinase from Streptomyces venezuelae P10. Curr Microbiol 53:265–269

    Article  PubMed  CAS  Google Scholar 

  24. Ndonde MJM, Semu E (2000) Preliminary characterization of some Streptomyces species from four Tanzanian soils and their antimicrobial potential against selected plant and animal pathogenic bacteria. World J Microbiol Biotechnol 16:595–599

    Article  Google Scholar 

  25. Nelson N (1944) A photometric adaptation of the Somogey method for the determination of glucose. J Biol Chem 152:375–380

    Google Scholar 

  26. Pandey A, Trivedi P, Kumar B, Chaurasia B, Palni LMS (2006) Soil microbial diversity from the Himalaya: need for documentation and conservation. NBA Scientific Bulletin No. 5 Chennai, Tamil Nadu, Indi, 64 pp

  27. Russell NJ (1990) Cold adaptation of microorganisms. Phil Trans R Soc Lond B 329:595–611

    Article  Google Scholar 

  28. Saadoun I, Al-Momani F (2000) Activity of North Jordan soil Streptomycete isolates against Candida albicans. World J Microbiol Biotechnol 16:139–142

    Article  Google Scholar 

  29. Semedo LTAS, Lindares AA, Gomes RC, Manfio GP, Alviano CS, Linhares LF, Coelho RRR (2001) Isolation and characterization of actinomycetes from Brazilian tropical soils. Microbiol Res 155:291–299

    PubMed  CAS  Google Scholar 

  30. Siddiqui KS, Cavicchioli R (2006) Cold-adapted enzymes. Ann Rev Biochem 75:403–433

    Article  PubMed  CAS  Google Scholar 

  31. Taddei A, Rodriguez MJ, Marquez-Vilchez E, Castelli C (2006) Isolation and identification of Streptomyces spp. from Venezuelan soils: morphological and biochemical studies 1. Microbiol Res 161:222–231

    Article  PubMed  CAS  Google Scholar 

  32. Taechowisan T, Lu C, Shen Y, Lumyong S (2005) Secondary metabolites from endophytic Streptomyces aureofaciens CMUAc130 and their antifungal activity. Microbiol 151:1691–1695

    Article  CAS  Google Scholar 

  33. Trejo-Estrada SR, Sepulveda IR, Crawford DL (1998) In vitro and in vivo antagonism of Streptomyces violaceusniger YCED9 against fungal pathogens of turfgrass. World J Microbiol Biotechnol 14:865–872

    Article  Google Scholar 

  34. Trivedi P, Pandey A, Palni LMS (2008) In vitro evaluation of antagonistic properties of Pseudomonas corrugata. Microbiol Res 163:329–336

    Article  PubMed  Google Scholar 

  35. Trudel J, Asselin A (1989) Detection of chitinase activity after polyacrylamide gel electrophoresis. Anal Biochem 178:362–366

    Article  PubMed  CAS  Google Scholar 

  36. Uchiyama T, Katouno F, Nikaidou N, Nonaka T, Sugiyama J, Watanabe T (2001) Roles of the exposed aromatic residues in crystalline chitin hydrolysis by chitinase A from Serratia marcesens 2170. J Biol Chem 276:41343–41349

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

Dr L. M. S. Palni (Director, G.B. Pant Institute of Himalayan Environment and Development, Almora) is thanked for encouragement and extending the facilities. Four anonymous reviewers are thanked for their valuable suggestions. Union Ministry of Environment and Forests, New Delhi, is acknowledged for financial support.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Anita Pandey.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Malviya, M.K., Pandey, A., Trivedi, P. et al. Chitinolytic Activity of Cold Tolerant Antagonistic Species of Streptomyces Isolated from Glacial Sites of Indian Himalaya. Curr Microbiol 59, 502–508 (2009). https://doi.org/10.1007/s00284-009-9466-z

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00284-009-9466-z

Keywords

Navigation