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Polyhydroxyalkanoate-based 3-hydroxyoctanoic acid and its derivatives as a platform of bioactive compounds

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Abstract

A library of 18 different compounds was synthesized starting from (R)-3-hydroxyoctanoic acid which is derived from the bacterial polymer polyhydroxyalkanoate (PHA). Ten derivatives, including halo and unsaturated methyl and benzyl esters, were synthesized and characterized for the first time. Given that (R)-3-hydroxyalkanoic acids are known to have biological activity, the new compounds were evaluated for antimicrobial activity and in vitro antiproliferative effect with mammalian cell lines. The presence of the carboxylic group was essential for the antimicrobial activity, with minimal inhibitory concentrations against a panel of bacteria (Gram-positive and Gram-negative) and fungi (Candida albicans and Microsporum gypseum) in the range 2.8–7.0 mM and 0.1–6.3 mM, respectively. 3-Halogenated octanoic acids exhibited the ability to inhibit C. albicans hyphae formation. In addition, (R)-3-hydroxyoctanoic and (E)-oct-2-enoic acids inhibited quorum sensing-regulated pyocyanin production in the opportunistic pathogen Pseudomonas aeruginosa PAO1. Generally, derivatives did not inhibit mammalian cell proliferation even at 3-mM concentrations, while only (E)-oct-2-enoic and 3-oxooctanoic acid had IC50 values of 1.7 and 1.6 mM with the human lung fibroblast cell line.

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References

  • Albert M, Seebach D, Duchardt E, Schwalbe H (2002) Synthesis and NMR analysis in solution of oligo(3-hydroxyalkanoic acid) derivatives with the side chains of alanine, valine, and leucine (β-depsides): coming full circle from PHB to β-peptides to PHB. Helv Chim Acta 85:633–658

    Article  CAS  Google Scholar 

  • Allen AD, Daley P, Ayorinde FO, Gugssa A, Anderson WA, Eribo BE (2012) Characterization of medium chain length (R)-3-hydroxycarboxylic acids produced by Streptomyces sp. JM3 and the evaluation of their antimicrobial properties. World J Microbiol Biotechnol 28:2791–2800

    Article  PubMed  CAS  Google Scholar 

  • Anessian S, Dhanoa DS, Beaulieu PL (1987) Synthesis of carbocycles from omega-substituted a, alfa beta-unsaturated esters via radical-induced cyclizations. Can J Chem 65:1859

    Article  Google Scholar 

  • Arkin AH, Hazer B (2002) Chemical modification of chlorinated microbial polyesters. Biomacromolecules 3:1327–1335

    Article  PubMed  CAS  Google Scholar 

  • Balducci E, Attolino E, Taddei M (2011) A stereoselective and practical synthesis of (E)-α,β-unsaturated ketones from aldehydes. Eur J Org Chem 2011:311–318

    Article  Google Scholar 

  • Brandl H, Gross RQ, Lenz RW, Fuller CR (1988) Pseudomonas oleovorans as a source of poly(β-hydroxyalkanoates) for potential applications as biodegradable polyesters. Appl Environ Microbiol 54:1977–1982

    PubMed  CAS  PubMed Central  Google Scholar 

  • Brinkerhoff RC, Tarazona HF, de Oliveira PM, Flores DC, Montes D’Oca CDR, Russowsky D, Montes D’Oca MG (2014) Synthesis of β-ketoesters from renewable resources and Meldrum’s acid. RSC Advances 4:49556–49559

    Article  CAS  Google Scholar 

  • Brown HC, Ramachandran PV (1991) The boron approach to asymmetric synthesis. Pure Appl Chem 63:307–316

    Article  CAS  Google Scholar 

  • Case-Green SC, Davies SG, Roberts PM, Russell AJ, Thomson JE (2008) Asymmetric synthesis of tetrahydrolipstatin and valilactone. Tetrahedron Asymmetry 19:2620–2631

    Article  CAS  Google Scholar 

  • Casey JT, O’Cleirigh C, Walsh PK, O’Shea DG (2004) Development of a robust microtiter plate-based assay method for assessment of bioactivity. J Micro Meth 58:327–334

    Article  CAS  Google Scholar 

  • Chen G-Q (2009) A microbial polyhydroxyalkanoates (PHA) based bio- and materials industry. Chem Soc Rev 38:2434–2446

    Article  PubMed  CAS  Google Scholar 

  • Chen G-Q (2011) Biofunctionalization of polymers and their applications. Adv Biochem Engin/Biotechnol 125:29–45

    Article  CAS  Google Scholar 

  • Chen G-Q, Wu Q (2005) The application of polyhydroxyalkanoates as tissue engineering materials. Biomaterials 26:6565–6578

    Article  PubMed  CAS  Google Scholar 

  • Collins JC, Hess WW, Frank FJ (1968) Dipyridine-chromium(VI) oxide oxidation of alcohols in dichloromethane. Tetrahedron Lett 9:3363–3366

    Article  Google Scholar 

  • de Rijk TC, van de Meer P, Eggink G, Weusthuis RA (2001) Methods for analysis of poly(3-hydroxyalkanoate) composition. In: Doi Y, Steinbuchel A (eds) Biopolymers: polyesters. II Properties and chemical synthesis, Vol 2. Wiley-VCH, pp. pp 1–pp17

  • de Roo G, Kellerhals MB, Ren Q, Witholt B, Kessler B (2002) Production of chiral R-3-hydroxyalkanoic acids and R-3-hydroxyalkanoic acid methylesters via hydrolytic degradation of polyhydroxyalkanoate synthesized by pseudomonads. Biotechnol Bioeng 77:717–722

    Article  PubMed  Google Scholar 

  • Delgado A, Ruiz M, Camps F, Hopital S, Guerrero A (1991) Synthesis of potential inhibitors of the biosynthesis of the sex pheromone of Spodoptera littoralis. Part I: Monofluorinated Fatty aCids Chem Phys Lipids 59:127–135

    CAS  Google Scholar 

  • Deng Y, Boon C, Chen S, Lim A, Zhang L-H (2013) Cis-2-dodecenoic acid signal modulates virulence of Pseudomonas aeruginosa through interference with quorum sensing systems and T3SS. BMC Microbiol 13:231

    Article  PubMed  PubMed Central  Google Scholar 

  • Desbois AP, Lawlor KC (2013) Antibacterial activity of long-chain polyunsaturated fatty acids against Propionibacterium acnes and Staphylococcus aureus. Mar Drugs 11:4544–4557

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Desbois AP, Smith VJ (2010) Antibacterial free fatty acids: activities, mechanisms of action and biotechnological potential. Appl Microbiol Biotechnol 85:1629–1642

    Article  PubMed  CAS  Google Scholar 

  • Desmaris L, Percina N, Cottier L, Sinou D (2003) Conversion of alcohols to bromides using a fluorous phosphine. Tetrahedron Lett 44:7589–7591

    Article  CAS  Google Scholar 

  • Doi Y, Abe C (1990) Biosynthesis and characterization of a new bacterial copolyester of 3-hydroxyalkanoates and 3-hydroxy-ω-chloroalkanoates. Macromolecules 23:3705–3707

    Article  CAS  Google Scholar 

  • El-Batta A, Jiang C, Zhao W, Anness R, Cooksy AL, Bergdahl M (2007) Wittig reactions in water media employing stabilized ylides with aldehydes. Synthesis of α,β-unsaturated esters from mixing aldehydes, α-bromoesters, and Ph3P in aqueous NaHCO3. J Org Chem 72:5244–5259

    Article  PubMed  CAS  Google Scholar 

  • Elbahloul Y, Steinbuchel A (2009) Large-scale production of poly(3-hydroxyoctanoic acid) by Pseudomonas putida GPo1 and a simplified downstream process. Appl Environ Microbiol 75:643–651

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Follonier S, Goyder MS, Silvestri AC, Crelier S, Kalman F, Riesen R, Zinn M (2014) Fruit pomace and waste frying oil as sustainable resources for the bioproduction of medium-chain-length polyhydroxyalkanoates. Int J Biol Macromol 71:42–52

    Article  PubMed  CAS  Google Scholar 

  • Gibson J, Sood A, Hogan DA (2009) Pseudomonas aeruginosa-Candida albicans interactions: localization and fungal toxicity of a phenazine derivative. Appl Environ Microbiol 75:504–513

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Giddens AC, Nielsen L, Boshoff HI, Tasdemir D, Perozzo R, Kaiser M, Wang F, Sacchettini JC, Copp BR (2008) Natural product inhibitors of fatty acid biosynthesis: synthesis of the marine microbial metabolites pseudopyronines A and B and evaluation of their anti-infective activities. Tetrahedron 64:1242–1249

    Article  CAS  Google Scholar 

  • Grage K, Jahns AC, Parlane N, Palanisamy R, Rasaih IA, Atwood JA, Rehm BHA (2009) Bacterial polyhydroxyalkanoate granules: biogenesis, structure, and potential use as nano-/micro-beads in biotechnological and biomedical applications. Biomacromolecules 10:660–669

    Article  PubMed  CAS  Google Scholar 

  • Hansen MB, Nielsen SE, Berg K (1989) Re-examination and further development of a precise and rapid dye method for measuring cell growth/cell kill. J Immunol Meth 119:203–210

    Article  CAS  Google Scholar 

  • Hon Y-S, Hsieh C-H, Liu Y-W (2005) Dibromomethane as one-carbon source in organic synthesis: total synthesis of (±)- and (â)-methylenolactocin. Tetrahedron 61:2713–2723

    Article  CAS  Google Scholar 

  • Kabara J, Swieczkowski DM, Conley AJ, Truant JP (1972) Fatty acids and derivatives as antimicrobial agents. Antimicrob Agents Chemotherapy 2:23–28

    Article  CAS  Google Scholar 

  • Kalia VC, Purohit HJ (2011) Quenching the quorum sensing system: potential antibacterial drug targets. Crit Rev Microbiol 37:121–140

    Article  PubMed  CAS  Google Scholar 

  • Lau GW, Hassett DJ, Ran H, Kong F (2004) The role of pyocyanin in Pseudomonas aeruginosa infection. Trends Mol Med 10:599–606

    Article  PubMed  CAS  Google Scholar 

  • Lee SY, Lee Y-H, Wang F (1999) Chiral compounds from bacterial polyesters: sugars to plastics to fine chemicals. Biotechnol Bioeng 65:363–368

    Article  PubMed  CAS  Google Scholar 

  • Marounek M, Skrivanova E, Rada V (2003) Susceptibility of Escherichia coli to C2-C18 fatty acids. Folia Microbiol 48:731–735

    Article  CAS  Google Scholar 

  • Marris E (2006) Marine natural products: drugs from the deep. Nature 443:904–905

    Article  PubMed  CAS  Google Scholar 

  • Morales DK, Grahl N, Okegbe C, Dietrich LE, Jacobs NJ, Hogan DA (2013) Control of Candida albicans metabolism and biofilm formation by Pseudomonas aeruginosa phenazines. MBio 4:e00526–e00512

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Mordant C, Dunkelmann P, Ratovelomanana-Vidal V, Genet J-P (2004) Dynamic kinetic resolution: an efficient route to anti α-amino-β-hydroxy esters via Ru-SYNPHOS catalyzed hydrogenation. Chem Comm 2004:1296–1297

    Article  Google Scholar 

  • Nikodinovic-Runic J, Guzik M, Kenny ST, Babu R, Werker A, O’Connor K (2013) Carbon-rich wastes as feedstocks for biodegradable polymer (polyhydroxyalkanoate) production using bacteria. Adv Appl Microbiol 84:139–200

    Article  PubMed  CAS  Google Scholar 

  • Noyori R, Kitamura M, Ohkuma T (2004) Toward efficient asymmetric hydrogenation: architectural and functional engineering of chiral molecular catalysts. P Natl Acad Sci USA 101:5356–5362

    Article  CAS  Google Scholar 

  • O’Connor S, Szwej E, Nikodinovic-Runic J, O’Connor A, Byrne AT, Devocelle M, O’Donovan N, Gallagher WM, Babu R, Kenny S, Zinn M, Zulian QR, O’Connor KE (2013) The anti-cancer activity of a cationic anti-microbial peptide derived from monomers of polyhydroxyalkanoate. Biomaterials 34:2710–2718

    Article  PubMed  Google Scholar 

  • O’Loughlin CT, Miller LC, Siryaporn A, Drescher K, Semmelhack MF, Bassler B (2013) A quorum-sensing inhibitor blocks Pseudomonas aeruginosa virulence and biofilm formation. P Natl Acad Sci USA 110:17981–17986

    Article  Google Scholar 

  • Ren Q, Grubelnik A, Hoerler M, Ruth K, Hartmann R, Felber H, Zinn M (2005) Bacterial poly(hydroxyalkanoates) as a source of chiral hydroxyalkanoic acids. Biomacromolecules 6:2290–2298

    Article  PubMed  CAS  Google Scholar 

  • Ren Q, Ruth K, Thony-Meyer L, Zinn M (2007) Process engineering for production of chiral hydroxycarboxylic acids from bacterial polyhydroxyalkanoates. Macromol Rapid Commun 28:2131–2136

    Article  CAS  Google Scholar 

  • Ren Q, Ruth K, Thony-Meyer L, Zinn M (2010) Enatiomerically pure hydroxycarboxylic acids: current approaches and future perspectives. Appl Microbiol Biotechnol 87:41–52

    Article  PubMed  CAS  PubMed Central  Google Scholar 

  • Ruth K, Grubelnik A, Hartmann R, Egli T, Zinn M, Ren Q (2007) Efficient production of (R)-3-hydroxycarboxylic acids by biotechnological conversion of polyhydroxyalkonoates and their purification. Biomacromolecules 8:279–286

    Article  PubMed  CAS  Google Scholar 

  • Sailer M, Dubicki KI, Sorensen JL (2015) The synthesis of medium-chain-length β-hydroxy esters via the Reformatsky reaction. Synthesis 47:79–82

    CAS  Google Scholar 

  • Sandoval A, Arias-Barrau E, Bermejo F, Canedo L, Naharro G, Olivera E, Luengo J (2005) Production of 3-hydroxy-n-phenylalkanoic acids by a genetically engineered strain of Pseudomonas putida. Appl Microbiol Biotechnol 67:97–105

    Article  PubMed  CAS  Google Scholar 

  • SDBS Web, http://sdbs.db.aist.go.jp (National Institute of Advanced Industrial Science and Technology, date of access 12/10/2014).

  • Shafreen RM, Muthamil S, Pandian SK (2014) Inhibition of Candida albicans virulence factors by novel levofloxacin derivatives. Appl Microbiol Biotechnol 98:6775–6785

    Article  PubMed  CAS  Google Scholar 

  • Skrivanova E, Savka OG, Marounek M (2004) In vitro effect of C2-C18 fatty acids on salmonellas. Folia Microbiol 49:199–202

    Article  CAS  Google Scholar 

  • Smith SM, Uteuliyev M, Takacs JM (2011) Catalytic asymmetric hydroboration of β,γ-unsaturated Weinreb amides: striking influence of the borane. Chem Comm 47:7812–7814

    Article  PubMed  CAS  Google Scholar 

  • Steinbüchel A, Valentin HE (1995) Diversity of bacterial polyhydroxyalkanoic acids. FEMS Microbiol Lett 128:219–228

    Article  Google Scholar 

  • Szwej E, Devocelle M, Kenny S, Guzik M, O’Connor S, Nikodinovic-Runic J, Radivojevic J, Maslak V, Byrne AT, Gallagher WM, Zulian QR, Zinn M, O’Connor KE (2015) The chain length of biologically produced (R)-3-hydroxyalkanoic acid affects biological activity and structure of anti-cancer peptides. J Biotechnol 204:7–12

    Article  PubMed  CAS  Google Scholar 

  • Takashi M, Daisuke I, Akira A (2003) Process for producing optically active 3-halogenocarboxylic acid esters and 3-azide-carboxylic acid esters. EPO Patent 1344763-A1.

  • Tortajada M, da Silva LF, Prieto MA (2013) Second-generation functionalized medium-chain-length polyhydroxyalkanoates: the gateway to high-value bioplastic applications. Int Microbiol 16:1–15

    PubMed  CAS  Google Scholar 

  • Wang Z, Zhao C, Pierce ME, Fortunak JM (1999) Enantioselective synthesis of β-hydroxy carboxylic acids: direct conversion of β-oxocarboxylic acids to enantiomerically enriched β-hydroxy carboxylic acids via neighboring group control. Tetrahedron: Asymm 10:225–228

    Article  CAS  Google Scholar 

  • Watanabe S, Fujita T, Sakamoto M, Arai T, Kttazume T (1989) Fluorination of hydroxyesters with N,N-diethyl-1,1,2,3,3,3-hexafluoro propaneamine. J Am Oil Chem Soc 66:1312–1315

    Article  CAS  Google Scholar 

  • Watanabe S, Fujita T, Suga K, Nasuno I (1983) Fluorination of fatty alcohols with 1,1,2,3,3,3-hexafluoropropyl diethylamine. J Oil Fat Ind 60:1678–1679

    CAS  Google Scholar 

  • Whooley MA, McLoughlin AJ (1982) The regulation of pyocyanin production in Pseudomonas aeruginosa. Eur J Appl Microbiol Biotechnol 15:161–166

    Article  CAS  Google Scholar 

  • Widmer KW, Soni KA, Hume ME, Beier RC, Jesudhasan P, Pillai SD (2007) Identification of poultry meat-derived fatty acids functioning as quorum sensing signal inhibitors to autoinducer-2 (AI-2). J Food Sci 72:M363–M368

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

This work has been financially supported by the Ministry of Education and Science, Republic of Serbia, under Grant No. 173048. JR was partially supported by research project BP2013 (Bioplastech Ltd., Dublin, Ireland).

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The authors declare that they have no competing interests.

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Correspondence to Jasmina Nikodinovic-Runic or Kevin E. O’Connor.

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Electronic Supplementary Information (ESI) available: [Spectral Data 1H NMR, 13C NMR and IR]. (PDF 1614 kb)

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Radivojevic, J., Skaro, S., Senerovic, L. et al. Polyhydroxyalkanoate-based 3-hydroxyoctanoic acid and its derivatives as a platform of bioactive compounds. Appl Microbiol Biotechnol 100, 161–172 (2016). https://doi.org/10.1007/s00253-015-6984-4

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