Journal of Molecular Biology
Regular articleThe Refined Crystallographic Structure of aDD-Peptidase Penicillin-target Enzyme at 1.6 Å Resolution
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Repurposing an Ancient Protein Core Structure: Structural Studies on FmtA, a Novel Esterase of Staphylococcus aureus
2019, Journal of Molecular BiologyCitation Excerpt :From the structural comparison studies, the sequence 342-LNG (LNG-box) of FmtA superposes with the KTG-box of DDCP. In PBPs and β-lactamases, the lysine (or histidine) of the KTG-box is involved in proton shuffling during catalysis [47]. In the case of FmtA, this position is occupied by a hydrophobic residue, Leu342.
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2013, Handbook of Proteolytic EnzymesMultivariate geometrical analysis of catalytic residues in the penicillin-binding proteins
2011, International Journal of Biochemistry and Cell BiologyCitation Excerpt :A complete list of structures, enzymes, and their features is given in Tables S1 and S2. Refs: (Amanuma and Strominger, 1980; Chen et al., 2009; Chesnel et al., 2003; Clarke et al., 2009; Contreras-Martel et al., 2006, 2009; Davies et al., 2001; Dessen et al., 2001; Duez et al., 2001; Fonze et al., 1999; Ghuysen et al., 1973; Gordon et al., 2000; Job et al., 2008; Kawai et al., 2009; Kelly and Kuzin, 1995; Kishida et al., 2006; Korat et al., 1991; Kozarich and Strominger, 1978; Kuzin et al., 1995; Lee et al., 2001; Leyh-Bouille et al., 1971, 1972; Lim and Strynadka, 2002; Lovering et al., 2007, 2008; Macheboeuf et al., 2005, 2007, 2008; Matsuhashi et al., 1979; McDonough et al., 2002; Meberg et al., 2004; Navratna et al., 2010; Nguyen-Disteche et al., 1982; Nicholas et al., 2003; Nicola et al., 2005b,a; Perkins et al., 1973; Pernot et al., 2004; Powell et al., 2009; Rhazi et al., 2003; Sauvage et al., 2005, 2007, 2008, 2009; Silvaggi et al., 2003, 2004, 2005; Sung et al., 2009; Tamura et al., 1976; van der Linden et al., 1992; Yamada et al., 2007, 2008). The definition of the geometrical parameters extracted in this study is provided in Table 2.
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